SH800S Cell Sorter - Resources

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Reference Publications

Genetics and Synthetic Biology

  1. Intraindividual dynamics of transcriptome and genome-wide stability of DNA methylation
    R. Furukawa, T. Hachiya, H. Ohmomo, Y. Shiwa, K. Ono, S. Suzuki, M. Satoh, J. Hitomi, K. Sobue and A. Shimizu
    Scientific Reports 6:26424, 2016
  2. Profiling of engineering hotspots identifies an allosteric CRISPR-Cas9 switch
    B. L. Oakes, D. C. Nadler, A. Flamholz, C. Fellmann, B. T. Staahl, J. A. Doudna and D. F. Savage
    Nature Biotechnology [Online published], 2016
  3. Hypomorphic phenotype of Foxn1 gene-modified rats by CRISPR/Cas9 system
    T. Goto, H. Hara, H. Nakauchi, S. Hochi and M. Hirabayashi
    Transgenic Research [Online published], 2016
  4. Dual transcriptional-translational cascade permits cellular level tuneable expression control
    R. Morra, J. Shankar, C. J. Robinson, S. Halliwell, L. Butler, M. Upton, S. Hay, J. Micklefield and N. Dixon
    Nucleic Acids Research 44:e21, 2016
  5. Human TUBG2 gene is expressed as two splice variant mRNAs and involved in cell growth
    T. Ohashi, T. Yamamoto, Y. Yamanashi and M. Ohsugi
    FEBS Letters 590:1053–1063, 2016
  6. Adjustment of Cell-Type Composition Minimizes Systematic Bias in Blood DNA Methylation Profiles Derived by DNA Collection Protocols
    Y. Shiwa, T. Hachiya, R. Furukawa, H. Ohmomo, K. Ono, H. Kudo, J. Hata, A. Hozawa, M. Iwasaki, K. Matsuda, N. Minegishi, M. Satoh, K. Tanno, T. Yamaji, K. Wakai, J. Hitomi, Y. Kiyohara, M. Kubo, H. Tanaka, S. Tsugane, M. Yamamoto, K. Sobue and A. Shimizu
    PLOS ONE 11:e0147519, 2016
  7. Analysis of unique mutations in the LPAR6 gene identified in a Japanese family with autosomal recessive woolly hair/hypotrichosis: Establishment of a useful assay system for LPA6
    R. Hayashi, A. Inoue, Y. Suga, J. Aoki and Y. Shimomura
    Journal of Dermatological Science 78:197-205, 2015
  8. Specific dephosphorylation at tyr-554 of git1 by ptprz promotes its association with paxillin and hic-5
    A. Fujikawa, M. Matsumoto, K. Kuboyama, R. Suzuki, and M. Noda
    PLOS ONE 10:e0119361, 2015
  9. Protein engineering of Cas9 for enhanced function
    B. L. Oakes, D. C. Nadler and D. F. Savage
    Methods in Enzymology 546:491–511, 2014


Cancer and Cell Biology

  1. Endothelial cell-selective adhesion molecule expression in hematopoietic stem/progenitor cells is essential for erythropoiesis recovery after bone marrow injury
    T. Sudo, T. Yokota, D. Okuzaki, T. Ueda, M. Ichii, T. Ishibashi, T. Isono, Y. Habuchi, K. Oritani and Y. Kanakura
  2. Oncolytic activity of a recombinant measles virus, blind to signaling lymphocyte activation molecule, against colorectal cancer cells
    Y. Amagai, T. Fujiyuki, M. Yoneda, K. Shoji, Y. Furukawa, H. Sato and C. Kai
    Scientific Reports 6:24572, 2016
  3. Haspin has multiple functions in the plant cell division regulatory network
    E. Kozgunova, T. Suzuki, M. Ito, T. Higashiyama and D. Kurihara
    Plant & Cell Physiology 57:848-861, 2016
  4. Left-right asymmetric cell intercalation drives directional collective cell movement in epithelial morphogenesis
    K. Sato, T. Hiraiwa, E. Maekawa, A. Isomura, T. Shibata and E. Kuranaga
    Nature Communications 6:10074, 2015
  5. The experimental power of FR900359 to study Gq-regulated biological processes
    R. Schrage, A. L. Schmitz, E. Gaffal, S. Annala, S. Kehraus, D. Wenzel, K. M. Büllesbach, T. Bald, A. Inoue, Y. Shinjo, S. Galandrin, N. Shridhar, M. Hesse, M. Grundmann, N. Merten, T. H. Charpentier, M. Martz, A. J. Butcher, T. Slodczyk, S. Armando, M. Effern, Y. Namkung, L. Jenkins, V. Horn, A. Stößel, H. Dargatz, D. Tietze, D. Imhof, C. Galés, C. Drewke, C. E. Müller, M. Hölzel, G. Milligan, A. B. Tobin, J. Gomeza, H. G. Dohlman, J. Sondek, T. K. Harden, M. Bouvier, S. A. Laporte, J. Aoki, B. K. Fleischmann, K. Mohr, G. M. König, T. Tüting and E. Kostenis
    Nature Communications 6:10156, 2015
  6. A recursive vesicle-based model protocell with a primitive model cell cycle
    K. Kurihara, Y. Okura, M. Matsuo, T. Toyota, K. Suzuki and T. Sugawara
    Nature Communications 6:8352, 2015
  7. Transforming growth factor-β signaling enhancement by long-term exposure to hypoxia in a tumor microenvironment composed of Lewis lung carcinoma cells
    C. Furuta, T. Miyamoto, T. Takagi, Y. Noguchi, J. Kaneko, S. Itoh, T. Watanabe and F. Itoh
    Cancer Science 106:1524–1533, 2015
  8. Generation of α1,3-galactosyltransferase and cytidine monophospho-N-acetylneuraminic acid hydroxylase gene double-knockout pigs
    S. Miyagawa, H. Matsunari, M. Watanabe, K. Nakano, K. Umeyama, R. Sakai, S. Takayanagi, T. Takeishi, T. Fukuda, S. Yashima, A. Maeda, H. Eguchi, H. Okuyama, M. Nagaya and H. Nagashima
    The Journal of Reproduction and Development 61:449–457, 2015
  9. Pharmacologic Wnt inhibition reduces proliferation, survival, and clonogenicity of glioblastoma cells
    U. D. Kahlert, A. K. Suwala, K. Koch, M. Natsumeda, B. A. Orr, M. Hayashi, J. Maciaczyk and C. G. Eberhart
    Journal of Neuropathology & Experimental Neurology 74:889-900, 2015
  10. An individual based computational model of intestinal crypt fission and its application to predicting unrestrictive growth of the intestinal epithelium
    C. Pin, A. Parker, A. P. Gunning, Y. Ohta, I. T. Johnson, S. R. Carding and T. Sato
    Integrative Biology 7:213-228, 2015
  11. Tetraspanin CD9 determines invasiveness and tumorigenicity of human breast cancer cells
    G. Rappa, T. M. Green, J. Karbanová, D. Corbeil and A. Lorico
    Oncotarget 6:7970-7991, 2015[]=3419&pubmed-linkout=1

    Generation of brain microvascular endothelial-like cells from human induced pluripotent stem cells by co-culture with C6 glioma cells
    H. Minami, K. Tashiro, A. Okada, N. Hirata, T. Yamaguchi, K. Takayama, H. Mizuguchi and K. Kawabata
    PLOS ONE 10:e0128890, 2015

  12. F-box protein FBXW7 inhibits cancer metastasis in a non-cell-autonomous manner
    K. Yumimoto, S. Akiyoshi, H. Ueo, Y. Sagara, I. Onoyama, H. Ueo, S. Ohno and M. Mori, K. Mimori and K. I. Nakayama
    The Journal of Clinical Investigation 125:621-635, 2015
  13. Internalization of isolated functional mitochondria: involvement of macropinocytosis
    T. Kitani, D. Kami, S. Matoba and S. Gojo
    Journal of Cellular and Molecular Medicine 18:1694-1703, 2014
  14. Precardiac deletion of Numb and Numblike reveals renewal of cardiac progenitors
    L. T. Shenje, P. Andersen, H. Uosaki, L. Fernandez, P. P. Rainer, G.-s. Cho, D.-i. Lee, W. Zhong, R. P. Harvey, D. A. Kass and C. Kwon
    eLife 3:e02164, 2014
  15. Mutations in Alström protein impair terminal differentiation of cardiomyocytes
    L. T. Shenje, P. Andersen, M. K. Halushka, C. Lui, L. Fernandez, G. B. Collin, N. Amat-Alarcon, W. Meschino, E. Cutz, K. Chang, R. Yonescu, D. A. S. Batista, Y. Chen, S. Chelko, J. E. Crosson, J. Scheel, L. Vricella, B. D. Craig, B. A. Marosy, D. W. Mohr, K. N. Hetrick, J. M. Romm, A. F. Scott, D. Valle, J. K. Naggert, C. Kwon, K. F. Doheny and D. P. Judge
    Nature Communications 5:3416, 2014
  16. Gonadotropin-releasing hormone (GnRH) receptors of cattle aggregate on the surface of gonadotrophs and are increased by elevated GnRH concentrations
    H. Kadokawa, K. Pandey, A. Nahar, U. Nakamura and F. O. Rudolf
    Animal Reproduction Science 150:84-95, 2014
  17. Direct human mitochondrial transfer: a novel concept based on the endosymbiotic theory
    T. Kitani, D. Kami, T. Kawasaki, M. Nakata, S. Matoba and S. Gojo
    Transplantation Proceedings 46:1233-1236, 2014

Immunology and Stem Cell Biology

  1. Laminin regulates PDGFRβ+ cell stemness and muscle development
    Y. Yao, E. H. Norris, C. Mason and S. Strickland
    Nature Communications 7:11415, 2016
  2. Role of PU.1 in MHC class II expression via CIITA transcription in plasmacytoid dendritic cells
    R. Miura, K. Kasakura, N. Nakano, M. Hara, K. Maeda, K. Okumura, H. Ogawa, T. Yashiro and C. Nishiyama
  3. Rat blastocysts from nuclear injection and time-lagged enucleation and their commitment to embryonic stem cells
    H. Hara, T. Goto, A. Takizawa, M. Sanbo, H. J. Jacob, T. Kobayashi, H. Nakauchi, S. Hochi and M. Hirabayashi
    Cellular Reprogramming 18:108-115, 2016
  4. Therapeutically engineered induced neural stem cells are tumour-homing and inhibit progression of glioblastoma
    J. R. Bagó, A. Alfonso-Pecchio, O. Okolie, R. Dumitru, A. Rinkenbaugh, A. S. Baldwin, C. R. Miller, S. T. Magness and S. D. Hingtgen
    Nature Communications 7:10593, 2016
  5. Apoptosis inhibitor of macrophage protein enhances intraluminal debris clearance and ameliorates acute kidney injury in mice
    S. Arai, K. Kitada, T. Yamazaki, R. Takai, X. Zhang, Y. Tsugawa, R. Sugisawa, A. Matsumoto, M. Mori, Y. Yoshihara, K. Doi, N. Maehara, S. Kusunoki, A. Takahata, E. Noiri, Y. Suzuki, N. Yahagi, A. Nishiyama, L. Gunaratnam, T. Takano and T. Miyazaki
    Nature Medicine 22:183–193, 2016
  6. IL-7 signalling represses Bcl-6 and the TFH gene program
    P. W. McDonald, K. A. Read, C. E. Baker, A. E. Anderson, M. D. Powell, A. Ballesteros-Tato and K. J. Oestreich
    Nature Communications 7:10285, 2016
  7. The induction of human myeloid derived suppressor cells through hepatic stellate cells is dose-dependently inhibited by the tyrosine kinase inhibitors nilotinib, dasatinib and sorafenib, but not sunitinib
    A. Heine, J. Schilling, B. Grünwald, A. Krüger, H. Gevensleben, S. A. Held, N. Garbi, C. Kurts, P. Brossart, P. Knolle, L. Diehl and B. Höchst
    Cancer Immunology, Immunotherapy 65:273-282, 2016
  8. Chd5 regulates MuERV-L/MERVL expression in mouse embryonic stem cells via H3K27me3 modification and histone H3.1/H3.2
    M. Hayashi, K. Maehara, A. Harada, Y. Semba, K. Kudo, H. Takahashi, S. Oki, C. Meno, K. Ichiyanagi, K. Akashi and Y. Ohkawa
    Journal of Cellular Biochemistry 117:780–792, 2016
  9. Innate-like function of memory Th17 cells for enhancing endotoxin-induced acute lung inflammation through IL-22
    R. Sakaguchi, S. Chikuma, T. Shichita, R. Morita, T. Sekiya, W. Ouyang, T. Ueda, H. Seki, H. Morisaki and A. Yoshimura
    International Immunology [Online published], 2015
  10. Differentiation of human ESCs to retinal ganglion cells using a CRISPR engineered reporter cell line
    V. M. Sluch, C. H. Davis, V. Ranganathan, J. M. Kerr, K. Krick, R. Martin, C. A. Berlinicke, N. Marsh-Armstrong, J. S. Diamond, H. Q. Mao and D. J. Zack
    Scientific Reports 5:16595, 2015
  11. Angiopoietin-like protein 2 induces proinflammatory responses in peritoneal cells
    M. Umikawa, A. Umikawa, T. Asato, K. Takei, G. Matsuzaki, K.-i. Kariya and C. C. Zhang
    Biochemical and Biophysical Research Communications 467:235-241, 2015
  12. Activin A in combination with OP9 cells facilitates development of Flk-1+ PDGFRa− and Flk-1+ PDGFRa+ hematopoietic mesodermal cells from murine embryonic stem cells
    S. Hirota and M. Ogawa
    Biochemical and Biophysical Research Communications 467:583-588, 2015
  13. Liposomes loaded with a STING pathway ligand, cyclic di-GMP, enhance cancer immunotherapy against metastatic melanoma
    T. Nakamura, H. Miyabe, M. Hyodo, Y. Sato, Y. Hayakawa and H. Harashima
    Journal of Controlled Release 216:149-157, 2015
  14. Vascular-resident CD169-positive monocytes and macrophages control neutrophil accumulation in the kidney with ischemia-reperfusion injury
    K. Karasawa, K. Asano, S. Moriyama, M. Ushiki, M. Monya, M. Iida, E. Kuboki, H. Yagita, K. Uchida, K. Nitta and M. Tanaka
    Journal of the American Society Nephrology 26:896-906, 2015
  15. Expression of coxsackievirus and adenovirus receptor separates hematopoietic and cardiac progenitor cells in fetal liver kinase 1-expressing mesoderm
    K. Tashiro, N. Hirata, A. Okada, T. Yamaguchi, K. Takayama, H. Mizuguchi and K. Kawabata
    Stem Cells Translational Medicine 4:424-436, 2015
  16. Intestinal CD169(+) macrophages initiate mucosal inflammation by secreting CCL8 that recruits inflammatory monocytes
    K. Asano, N. Takahashi, M. Ushiki, M. Monya, F. Aihara, E. Kuboki, S. Moriyama, M. Iida, H. Kitamura, C. H. Qiu, T. Watanabe and M. Tanaka
    Nature Communications 6:7802, 2015
  17. MHC-matched induced pluripotent stem cells can attenuate cellular and humoral immune responses but are still susceptible to innate immunity in pigs
    Y. Mizukami, T. Abe, H. Shibata, Y. Makimura, S. H. Fujishiro, K. Yanase, S. Hishikawa, E. Kobayashi and Y. Hanazono
    PLOS ONE 9:e98319, 2014
  18. Prostaglandin E2 promotes post‐infarction cardiomyocyte replenishment by endogenous stem cells
    Y.‐C. Hsueh, J. M F Wu, C.‐K. Yu, K. K Wu and P. C. H. Hsieh
    EMBO Molecular Medicine 6:496-503, 2014
  19. Downregulation of PRRX1 confers cancer stem cell-like properties and predicts poor prognosis in hepatocellular carcinoma
    H. Hirata, K. Sugimachi , Y. Takahashi, M. Ueda, S. Sakimura, R. Uchi, J. Kurashige, Y. Takano, S. Nanbara, H. Komatsu, T. Saito, Y. Shinden, T. Iguchi, H. Eguchi, K. Atsumi, K. Sakamoto, T. Doi, M. Hirakawa, H. Honda and K. Mimori
    Annals of Surgical Oncology 22 Suppl. 3:1402-1409, 2014


  1. Negative regulation of DSS-induced experimental colitis by PILRα
    K. Kishida, M. Kohyama, Y. Kurashima, Y. Kogure, J. Wang, K. Hirayasu, T. Suenaga, H. Kiyono, J. Kunisawa and H. Arase
    International Immunology 27:307-314, 2015
  2. Microbial abundance in surface ice on the Greenland Ice Sheet
    M. Stibal, E. Gözdereliler, K. A. Cameron, J. E. Box, I. T. Stevens, J. K. Gokul, M. Schostag, J. D. Zarsky, A. Edwards, T. D. Irvine-Fynn and C. S. Jacobsen
    Frontiers in Microbiology 6:225, 2015
  3. MtgA deletion-triggered cell enlargement of Escherichia coli for enhanced intracellular polyester accumulation
    R. Kadoya, K. Matsumoto, T. Ooi and S. Taguchi
    PLOS ONE 10:e0125163, 2015