Overview

The ID7000™ Spectral Cell Analyzer delivers precision and flexibility for a wide range of experimental needs – from simple panels to complex, high-parameter studies. Its advanced optics feature a diffraction grating and 32-channel PMTs, enabling consistent, full-spectrum detection. Sony’s Weighted Least Squares Method (WLSM) ensures accurate unmixing and reduced spillover. With support for up to 8 autofluorescence parameters, the ID7000 provides enhanced clarity – even in autofluorescent samples. No matter the application, the ID7000 has the tools to adapt to your workflow and grow with your research.

The Spectral Flow Analysis (SFA) - Life Sciences Cloud Platform is a cloud-based solution that can efficiently perform a wide array of analysis protocols.

Learn more →

https://videos.sonybiotechnology.com/stream/ID7000_overview_logo.m4v

Product Highlights

ID7000 System Overview

The ID7000 is Sony’s most advanced spectral analyzer, capable of supporting everything from basic immunophenotyping to complex high-parameter panels. With up to 7 lasers and 186 detectors—the most of any commercially available system—the ID7000 offers unmatched detection capacity and a broad excitation range (320–808 nm), supporting 44+ color panels and compatibility with emerging fluorochromes. Intuitive software, automated setup and QC, and a powerful Spectral Reference Library streamline workflows, reducing the need for repeated single-color controls. The Autofluorescence Finder improves resolution in complex tissues, while the built-in AutoSampler enables walkaway operation across multiple plate formats. Purpose-built for precision, scalability, and ease of use, the ID7000 sets the standard for modern spectral flow cytometry.

ID7000 system and peripherals

High Capability Optics

The ID7000 features a diffraction grating–based optical system that evenly disperses emitted light across 32-channel PMT arrays, capturing continuous spectral data at ~10 nm resolution. This high resolution enables precise signal separation, minimizes spectral overlap, and improves unmixing performance. With a broad detection range, the system supports a wide variety of fluorochromes including newly developed dyes without requiring hardware changes, delivering cleaner data, greater flexibility, and confidence in every channel.

Key Features:

The ID7000 Spectral Cell Analyzer can detect wavelengths from 360 nm to 920 nm in the 7-laser configuration. The signal is captured using a combination of 32-channel PMT arrays and individual PMTs. The signal above 800 nm is detected with specialized InGaAs PMTs to ensure data quality.

High resolution spectral signatures

High-Resolution Spectral Profiles

This plot shows spectral signatures collected across multiple lasers using the ID7000’s 32-channel PMT arrays. With ~10nm resolution and the WLSM unmixing algorithm, the system accurately separates closely spaced fluorochromes - enabling reliable detection of dim and overlapping markers across complex panels.

Efficient Operation

The ID7000 is built for efficient, high-quality data acquisition. Its Standardization Mode ensures reproducible results across days and instruments, while the Spectral Reference Library eliminates the need to reacquire single-color controls for each run—saving time and reagents. The integrated Autofluorescence Finder improves data resolution by treating autofluorescence as a separate parameter, reducing background fluorescence. Together, these tools simplify operation, reduce variability, and maximize productivity in both routine and high-parameter experiments.
Two researchers working in a lab with the ID7000.

High-throughput AutoSampler

Automation overview video poster showing autosmapler operating.

https://videos.sonybiotechnology.com/download/ID7000_Automation_Overview.mp4

The integrated AutoSampler supports a wide range of formats—including 5 mL FACS tubes, 96-well plates (U-, V-, and flat-bottom), mid- and full-depth plates, and 384-well plates—without requiring hardware changes. Its vacuum-driven fluidics, automated clog detection, and self-cleaning probe ensure smooth operation and minimal carryover. Whether processing a few tubes or a full plate, the ID7000 enables true walkaway acquisition and consistent performance across runs. Learn about enabling high-throughput plate handling automation.

Data Quality

The ID7000 is engineered to distinguish even closely overlapping fluorochromes with confidence. Its powerful WLSM algorithm precisely separates fluorophores with similar emission profiles, minimizing spillover and improving resolution in densely populated panels. The system’s fine spectral resolution is further enhanced by the 320 nm deep UV laser, which adds 35 additional detection channels from 360 nm to 840 nm. Together, these innovations ensure accurate identification of dim, rare, and spectrally adjacent markers in any panel.

FIt-SNE visualization plot

High Resolution Insights with the SFA Platform

This FIt-SNE visualization - generated using the SFA Life Sciences Cloud Platform - illustrates how the ID7000’s clean, well-separated data enables effective dimensionality reduction and clustering. With precise spectral unmixing and support for autofluorescence management, the ID7000 lays the foundation for high-confidence downstream analysis of complex cell populations.

Flexible Workflows

Screenshot of Spectral Reference Library
The ID7000 software is designed for flexibility, whether you're setting up new experiments or refining established panels. Live Unmixing provides real-time feedback during acquisition, allowing users to monitor signal quality as data is collected. The Spectral Reference Library enables reuse of validated single-color controls across multiple experiments, reducing preparation time. With the Spectral Reference Adjuster, users can fine-tune unmixing post-acquisition without re-running samples. These tools support efficient, adaptable workflows suited to a wide range of research needs.

Acquisition to Analysis

The ID7000 supports a complete spectral workflow—from high-resolution acquisition to in-depth data analysis. Data collected on the system can be seamlessly imported to the Spectral Flow Analysis (SFA), Life Sciences Cloud Platform. SFA offers dimensionality reduction and clustering algorithms to uncover patterns in complex datasets, helping researchers visualize rare populations, explore heterogeneity, and draw deeper biological insights. Together, the ID7000 and SFA enable an end-to-end workflow that scales from routine assays to high-dimensional discovery. Learn more about SFA.

High Resolution Insights with the SFA Platform

Data visualization using UMAP and BL-FlowSOM.

Interviews

Videos

Application Highlights

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Support and Ordering

Laser Configurations

Setup and Maintenance Products